Journal articles and other publications
- Büttgen L, Simianer H, Pook T (2021) MoBPSweb: Möglichkeiten realitätsnaher Simulationen von Tierzuchtprogrammen. In: Genetisch Statistischer Ausschuss der DGfZ. Kassel, Germany, 20.09.-22.09.2021.
- Büttgen L, Simianer H, Pook T (2021) Can genotyping and breeding value estimation for hens increase efficiency of layer breeding? In: Annual Meeting of EAAP. Davos, Switzerland, 30.08.-03.09.2021.
- Diesterbeck U. S., Ahsendorf H. P., Frenzel A., Sharifi A.R., Schirrmann T., Czerny Claus-P. (2021) Characterization of an In Vivo Neutralizing Anti-Vaccinia Virus D8 Single-Chain Fragment Variable (scFv) from a Human Anti-Vaccinia Virus-Specific Recombinant Library, Vaccines 2021, 9(11), 1308; https://doi.org/10.3390/vaccines9111308.
- Geibel, J., Reimer, C., Weigend, S., Weigend, A., Pook, T., Simianer, H. (2021), How array design creates SNP ascertainment bias. PLoS ONE 16(3): e0245178. https://doi.org/10.1371/journal.pone.0245178.
- Geibel, J., Reimer, C., Pook, T., Weigend, S., Weigend, A., Simianer, H. (2021), How imputation can mitigate SNP ascertainment Bias, BMC Genomics volume 22, Article number: 340; https://doi.org/10.1186/s12864-021-07663-6
- Ganteil A, Pook T, Rodriguez-Ramilo S, Ligonesche B, Larzul C (2021) Comparison (2021) A strategy for maximizing genetic diversity in the first generation of a pig synthetic line. In: Annual Meeting of EAAP. Davos, Switzerland, 30.08.-03.09.2021.
- Hosseini, S.,Schmitt, A.O., Tetens, J., Brenig, B., Simianer, H., Sharifi, A.R., Gültas, M., (2021), In Silico Prediction of Transcription Factor Collaborations Underlying Phenotypic Sexual Dimorphism in Zebrafish (Danio rerio), Genes 2021, 12(6), 873; https://doi.org/10.3390/genes12060873
- Hassanpour A., Simianer H, Pook T (2021): Beyond Scenarios – General Optimization of Breeding Programs (MoBPSopti)
- Jansen M.H., Zschiesche M., Albers D., Wemheuer W., Sharifi R., Hummel J., (2021), Accuracy of Subclinical Ketosis Detection with Rapid Test Methods for BHBA in Blood in Commercial Dairy Farms, Dairy 2021, 2(4), 671-683; https://doi.org/10.3390/dairy2040052
- Jansen, S., Baulain U., Habig, C., Ramzan, F., Schauer, J., Schmitt, A.O., Scholz, A.M., Sharifi, A.R., Weigend, A., Weigend, S. (2021),Identification and Functional Annotation of Genes Related to Bone Stability in Laying Hens Using Random Forests,Genes 2021, 12(5), 702; https://doi.org/10.3390/genes12050702
- Malomane, D.K., Weigend, S., Schmitt, A.O. (2021), Genetic diversity in global chicken breeds in relation to their genetic distances to wild populations. Genetics Selection Evolution, 53, 36; https://doi.org/10.1186/s12711-021-00628-z
- Mensching A., Zschiesche M., Hummel J., Grelet C., Gengler N., Dänicke S., Sharifi A.R., (2021), Development of a subacute ruminal acidosis risk score and its prediction using milk mid-infrared spectra in early-lactation cows, Volume 104, Issue 4, Pages 4615-4634; https://doi.org/10.3168/jds.2020-19516
- Pook, T., Büttgen, L., Ganesan, A., Ha, N-T., Simianer, H., (2021), MoBPSweb: A Web-Based Framework to Simulate and Compare Breeding Programs. G3 Genes|Genomes|Genetics, Volume 11, Issue 2; https://doi.org/10.1093/g3journal/jkab023
- Pook, T., Nemri, E., Gonzalez Segovia, E.G., Simianer, H., Schoen, C.C., (2021), Increasing calling accuracy, coverage, and read depth in sequence data by the use of haplotype blocks, bioRxiv; https://doi.org/10.1101/2021.01.07.425688
- Pook, T., Reimer, C., Freudenberg, A., Büttgen, L., Geibel, J., Ganesan, A., Ha N-T., Schlather, M., Mikkelsen, Lars F., Simianer, H., (2021), The Modular Breeding Program Simulator (MoBPS) allows efficient simulation of complex breeding programs, Animal Production Science; https://doi.org/10.1071/AN21076.
- Reimer C., Pook T, Peripolli E., Simianer H (2021) Combining whole-population genotyping and stochastic simulation to improve conservation management. In: Annual Meeting of EAAP. Davos, Switzerland, 30.08.-03.09.2021.
- Simianer, H., Reimer, C. (2021), COVID-19: a “black swan” and what animal breeding can learn from it, Animal Frontiers, Volume 11, 57–59; https://doi.org/10.1093/af/vfaa046
- Simianer, H. (2021), Harvest Moon: Some personal thoughts on past and future directions in animal breeding research, Journal of Animal Breeding and Genetics, 138, 135-136; https://doi.org/10.1111/jbg.12538.
- Simianer, H., Büttgen, L., Ganesan, A., Ha, N-T., Pook, T. (2021), A unifying concept of animal breeding programmes, Journal of Animal Breeding and Genetics, 138, 137-150; https://doi.org/10.1111/jbg.12534.
- Nolte, T., Jansen, S., Weigend, S., Moerlein, D., Halle, I., Simianer, H., Sharifi, A.R. (2021), Genotypic and Dietary Effects on Egg Quality of Local Chicken Breeds and Their Crosses Fed with Faba Beans, Animals 2021, 11, 1947; https://doi.org/10.3390/ani11071947
- Vojgani, E., Pook, T. , and Simianer H. (2021) Phenotype Prediction Under Epistasis. Springer Science+Business Media, LLC, part of Springer Nature 2021, Chapter 8 (pp 105-120) in: Ka-Chun Wong (ed.), Epistasis: Methods and Protocols, Methods in Molecular Biology, vol. 2212, https://doi.org/10.1007/978-1-0716-0947-7_8